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Guides and Tutorials
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Guidance on how to get started with our data :
Using DWI Data
This tutorial explains how to calculate a Marmoset brain connectivity matrix using DWI data from the Brain/MINDS NA216 dataset and the Brain/MINDS 3D digital brain atlas.
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Contributor: Connectome Analysis Unit
Tutorial on How to Retrieve Brain/MINDS Datasets Using DataLad
A DataLad starter that explain how to retrieve Brain/MINDS datasets using Python or the DataLad command.
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Contributor: Connectome Analysis Unit
A Beginners Tutorial on How to Inspect NIfTI Brain Data Using Python
Python code for beginners on how to inspect brain data in the NIfTI data format, with the Brain/MINDS atlas data being used as an example.
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Contributor: Connectome Analysis Unit
Image Registration
Tutorial that explains step by step how to perform image registration using ANTs on data from Brain/MINDS data portal.
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Contributor: Connectome Analysis Unit
How to Make a Symmetric Brain Image
Tutorial that explains step-by-step how to use image registration to make a symmetric brain image.
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Contributor: Connectome Analysis Unit
View Brain Flat Map Using Connectome Workbench
Video tutorial that explains how to view Brain/MINDS Marmoset brain flat map package using Connectome Workbench
Contributor: Connectome Analysis Unit